Methods for and applications of phylogenetic tree inference have proliferated in studies of cancer genomics. Tumour phylogeny methods have become important tools for making sense of the complexity ...

A phylogenetic tree, also known as a phylogeny, is a diagram that depicts the lines of evolutionary descent of different species, organisms, or genes from a common ancestor.

Object Details Author Hall, Barry G. 1942- Contents Read me first! -- Tutorial : estimate a tree! -- Acquiring -- Aligning the sequences -- Major methods for estimating phylogenetic trees -- ...

In this study, we use individual-based numerical simulations on stochastic phylogenetic trees to clarify the relationship between phylogenetic signal, rate, and evolutionary process. Under the ...

In this article we extend the model of language evolution exemplified in Ringe et al. 2002, which recovers phylogenetic trees optimized according to a criterion of weighted maximum compatibility, to ...

The tool, called PsiPartition, improves both the computational efficiency of the data analysis and the accuracy of the phylogenetic trees that visualize these relationships.

10 million sequences of COVID-19’s genomic code have now been organized into a phylogenetic tree in the UC Santa Cruz SARS-CoV-2 Browser, which is the largest tree of genomic sequences of a single ...

The COVID-19 phylogenetic tree, called UShER, was created by UCSC researchers and is the primary tool used by health officials worldwide to track the spread of variants in their community.

This phylogenetic tree, built from genetic sequencing and fossil data, helps explain the relationships between different kinds of insects across millions of years of evolution.

The resulting phylogenetic estimate offers novel insights into the rapid radiation of modern birds and provides a taxon-rich backbone tree for future comparative studies.” ...